EnhancerDB
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  3. rs534586089[chr1:52366539]
Enhancers that have rs534586089[chr1:52366539]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52359912 52371075 enh11849
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs534586089[chr1:52366539]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52366527 52366547 RREB1 JASPAR yes 28874665
chr1 52366532 52366544 FOXC2 JASPAR yes 28874667
chr1 52366534 52366549 FOXP1 JASPAR yes 28874668
chr1 52366536 52366551 FOXP1 JASPAR yes 28874669
chr1 52366539 52366554 FOXP1 JASPAR yes 28874670
Genes associated with rs534586089[chr1:52366539], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More