EnhancerDB
  1. Home
  2. SNP
  3. rs534634430[chr17:39706893]
Enhancers that have rs534634430[chr17:39706893]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39688905 39708275 enh17150
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs534634430[chr17:39706893]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39705350 39706956 ZNF143 GTRD no Epithelial (MCF-7) 21757884
chr17 39705350 39706956 ZNF143 GTRD no Epithelial (MCF-7) 108259023
chr17 39705587 39706910 ZNF143 GTRD no Epithelial (MCF-7) 21757916
chr17 39706647 39707282 TCF7L2 GTRD no Colon (HCT116) 21757954
chr17 39706833 39707284 ZNF143 GTRD no Epithelial (MCF-7) 21757955
chr17 39706880 39706897 RARA JASPAR yes 54264229
chr17 39706880 39706897 RXRA JASPAR yes 54264230
chr17 39706889 39706898 THAP1 JASPAR yes 54264232
chr17 39706892 39706896 LFA1 TRANSFAC yes 54264233
Genes associated with rs534634430[chr17:39706893], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More