EnhancerDB
  1. Home
  2. SNP
  3. rs534778769[chr1:117889101]
Enhancers that have rs534778769[chr1:117889101]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117874505 117891355 enh12197
Prostate (PC-3) Large Intestine Placenta Peripheral Blood (MM.1S) Uterus Lung (PC-9) Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs534778769[chr1:117889101]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117889087 117889102 STAT1 JASPAR yes 31875979
chr1 117889094 117889109 HNF1A JASPAR yes 31875982
chr1 117889095 117889108 HNF1B JASPAR yes 31875983
chr1 117889099 117889112 POU2F2 JASPAR yes 31875984
chr1 117889099 117889113 POU1F1 JASPAR yes 31875985
chr1 117889100 117889111 FOXB1 JASPAR yes 31875986
chr1 117889100 117889112 POU3F1 JASPAR yes 31875987
chr1 117889100 117889112 POU3F2 JASPAR yes 31875988
chr1 117889100 117889113 POU3F3 JASPAR yes 31875989
chr1 117889101 117889105 YY1 TRANSFAC yes 31875990
chr1 117889101 117889113 POU2F1 JASPAR yes 31875991
Genes associated with rs534778769[chr1:117889101], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More