EnhancerDB
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  3. rs534905238[chr19:7213366]
Enhancers that have rs534905238[chr19:7213366]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 7186985 7220155 enh17891
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Large Intestine Blood (GM12878) Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs534905238[chr19:7213366]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 7213351 7213366 FOXP1 JASPAR yes 112306517
chr19 7213351 7213372 IRF1 JASPAR yes 112306518
chr19 7213352 7213367 FOXP1 JASPAR yes 112306519
chr19 7213352 7213373 IRF1 JASPAR yes 112306520
chr19 7213353 7213368 FOXP1 JASPAR yes 112306521
chr19 7213353 7213374 IRF1 JASPAR yes 112306522
chr19 7213354 7213369 FOXP1 JASPAR yes 112306523
chr19 7213354 7213375 IRF1 JASPAR yes 112306524
chr19 7213355 7213370 FOXP1 JASPAR yes 112306525
chr19 7213355 7213376 IRF1 JASPAR yes 112306526
chr19 7213356 7213371 FOXP1 JASPAR yes 112306527
chr19 7213358 7213373 FOXP1 JASPAR yes 112306528
chr19 7213359 7213374 STAT2 JASPAR yes 112306529
chr19 7213360 7213375 FOXP1 JASPAR yes 112306530
chr19 7213362 7213374 FOXC2 JASPAR yes 112306531
chr19 7213362 7213382 RREB1 JASPAR yes 112306532
chr19 7213363 7213374 FOXP2 JASPAR yes 112306533
chr19 7213364 7213379 FOXP1 JASPAR yes 112306534
chr19 7213365 7213376 FOXA1 JASPAR yes 112306535
chr19 7213365 7213380 FOXA1 JASPAR yes 112306536
chr19 7213366 7213378 FOXC2 JASPAR yes 112306537
Genes associated with rs534905238[chr19:7213366], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More