EnhancerDB
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  3. rs534966671[chr17:29907079]
Enhancers that have rs534966671[chr17:29907079]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 29902607 29916333 enh17096
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Placenta Breast Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs534966671[chr17:29907079]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 29907074 29907083 SNAI2 JASPAR yes 53847126
chr17 29907074 29907084 ID4 JASPAR yes 53847127
chr17 29907074 29907084 TCF3 JASPAR yes 53847128
chr17 29907074 29907084 TCF4 JASPAR yes 53847129
chr17 29907079 29907088 HIC2 JASPAR yes 53847130
Genes associated with rs534966671[chr17:29907079], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More