EnhancerDB
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  3. rs535023856[chr17:55680676]
Enhancers that have rs535023856[chr17:55680676]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55673238 55692440 enh4492
Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs535023856[chr17:55680676]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55680667 55680685 ESR2 JASPAR yes 54974090
chr17 55680671 55680681 BHLHE40 JASPAR yes 54974091
chr17 55680671 55680681 CLOCK JASPAR yes 54974092
chr17 55680671 55680681 HEY1 JASPAR yes 54974093
chr17 55680671 55680681 HEY2 JASPAR yes 54974094
chr17 55680671 55680681 MNT JASPAR yes 54974095
chr17 55680672 55680682 MAX JASPAR yes 54974096
chr17 55680673 55680678 MYC TRANSFAC yes 54974097
chr17 55680673 55680678 USF1 TRANSFAC yes 54974098
chr17 55680673 55680678 USF2 TRANSFAC yes 54974099
Genes associated with rs535023856[chr17:55680676], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More