EnhancerDB
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  3. rs535275961[chr1:12197561]
Enhancers that have rs535275961[chr1:12197561]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12196945 12220680 enh11507
Prostate (PC-3) Large Intestine Ovary Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Uterus Thymus Heart
Transcript factors that have rs535275961[chr1:12197561]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12197553 12197567 ONECUT2 JASPAR yes 26802077
chr1 12197553 12197567 ONECUT3 JASPAR yes 26802078
chr1 12197558 12197573 IRF9 JASPAR yes 26802079
chr1 12197559 12197573 IRF7 JASPAR yes 26802080
chr1 12197560 12197574 STAT1 JASPAR yes 26802081
chr1 12197560 12197578 IRF2 JASPAR yes 26802082
Genes associated with rs535275961[chr1:12197561], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More