EnhancerDB
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  3. rs535619275[chr17:53523654]
Enhancers that have rs535619275[chr17:53523654]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs535619275[chr17:53523654]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53523650 53523661 NFIL3 JASPAR yes 54851905
chr17 53523651 53523655 YY1 TRANSFAC yes 54851906
chr17 53523651 53523663 DBP JASPAR yes 54851907
chr17 53523651 53523663 HLF JASPAR yes 54851908
chr17 53523651 53523663 TEF JASPAR yes 54851909
chr17 53523653 53523664 NFIL3 JASPAR yes 54851910
Genes associated with rs535619275[chr17:53523654], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More