EnhancerDB
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  3. rs535623049[chr1:90417004]
Enhancers that have rs535623049[chr1:90417004]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 90404665 90425035 enh485
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs535623049[chr1:90417004]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 90416991 90417010 PAX5 JASPAR yes 30637870
chr1 90416998 90417007 HIC2 JASPAR yes 30637871
chr1 90416999 90417015 ZNF143 JASPAR yes 30637872
chr1 90417001 90417005 LFA1 TRANSFAC yes 30637873
Genes associated with rs535623049[chr1:90417004], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More