EnhancerDB
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  3. rs535768396[chr1:222000010]
Enhancers that have rs535768396[chr1:222000010]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 221995465 222021667 enh12697
Liver Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs535768396[chr1:222000010]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 221999961 222000611 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21382804
chr1 221999961 222000611 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107872201
chr1 221999991 222000012 IRF1 JASPAR yes 35572041
chr1 221999991 222000012 ZNF263 JASPAR yes 35572042
chr1 221999995 222000016 IRF1 JASPAR yes 35572043
chr1 221999995 222000016 ZNF263 JASPAR yes 35572044
chr1 221999999 222000020 IRF1 JASPAR yes 35572045
chr1 221999999 222000020 ZNF263 JASPAR yes 35572046
chr1 222000003 222000024 IRF1 JASPAR yes 35572047
chr1 222000003 222000024 ZNF263 JASPAR yes 35572048
chr1 222000007 222000028 IRF1 JASPAR yes 35572049
chr1 222000007 222000028 ZNF263 JASPAR yes 35572050
Genes associated with rs535768396[chr1:222000010], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More