EnhancerDB
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  3. rs535963058[chr17:46559888]
Enhancers that have rs535963058[chr17:46559888]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 46553725 46585590 enh4456
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs535963058[chr17:46559888]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 46559869 46559889 RREB1 JASPAR yes 54588158
chr17 46559870 46559890 RREB1 JASPAR yes 54588159
chr17 46559873 46559888 RUNX2 JASPAR yes 54588160
chr17 46559873 46559894 IRF1 JASPAR yes 54588161
chr17 46559874 46559894 RREB1 JASPAR yes 54588162
chr17 46559875 46559890 IRF9 JASPAR yes 54588163
chr17 46559875 46559895 RREB1 JASPAR yes 54588164
chr17 46559876 46559890 IRF7 JASPAR yes 54588165
chr17 46559878 46559890 IRF1 JASPAR yes 54588166
chr17 46559878 46559893 RUNX2 JASPAR yes 54588167
chr17 46559878 46559899 IRF1 JASPAR yes 54588168
chr17 46559880 46559895 IRF9 JASPAR yes 54588169
chr17 46559880 46559900 RREB1 JASPAR yes 54588170
chr17 46559881 46559895 IRF7 JASPAR yes 54588171
chr17 46559883 46559895 IRF1 JASPAR yes 54588172
chr17 46559883 46559898 FOXP1 JASPAR yes 54588173
chr17 46559883 46559904 IRF1 JASPAR yes 54588174
chr17 46559885 46559905 RREB1 JASPAR yes 54588175
chr17 46559888 46559900 IRF1 JASPAR yes 54588176
chr17 46559888 46559903 FOXP1 JASPAR yes 54588177
Genes associated with rs535963058[chr17:46559888], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More