EnhancerDB
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  3. rs535975139[chr1:41964068]
Enhancers that have rs535975139[chr1:41964068]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41956025 41971975 enh11789
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Muscle (A673) Heart
Transcript factors that have rs535975139[chr1:41964068]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41964059 41964071 GLI2 JASPAR yes 28395780
chr1 41964059 41964074 RUNX2 JASPAR yes 28395781
chr1 41964060 41964070 RUNX3 JASPAR yes 28395782
chr1 41964066 41964087 REST JASPAR yes 28395783
Genes associated with rs535975139[chr1:41964068], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More