EnhancerDB
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  3. rs535988513[chr1:203556628]
Enhancers that have rs535988513[chr1:203556628]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203556465 203587575 enh12561
Brain (SK-N-MC) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs535988513[chr1:203556628]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203555242 203560078 ZNF274 GTRD no Cervix (HeLa-S3) 21369557
chr1 203555916 203559077 ZNF274 GTRD no Cervix (HeLa-S3) 21369558
chr1 203556229 203556862 ZNF143 GTRD no Epithelial (MCF-7) 21369559
chr1 203556424 203556872 ZNF143 GTRD no Epithelial (MCF-7) 21369560
chr1 203556522 203556945 ZNF143 GTRD no Epithelial (MCF-7) 21369561
chr1 203556622 203556643 IRF1 JASPAR yes 34642990
chr1 203556624 203556645 IRF1 JASPAR yes 34642991
chr1 203556626 203556641 FOXP1 JASPAR yes 34642992
chr1 203556627 203556642 FOXP1 JASPAR yes 34642993
chr1 203556628 203556643 FOXP1 JASPAR yes 34642994
Genes associated with rs535988513[chr1:203556628], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More