EnhancerDB
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  3. rs535993546[chr1:202039196]
Enhancers that have rs535993546[chr1:202039196]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs535993546[chr1:202039196]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202036767 202039399 ZNF274 GTRD no Cervix (HeLa-S3) 21366411
chr1 202038689 202039505 ZNF143 GTRD no Epithelial (MCF-7) 21366424
chr1 202038836 202039438 ZNF274 GTRD no Bone Marrow (K562) 21366425
chr1 202039190 202039204 PLAG1 JASPAR yes 34549341
chr1 202039196 202039207 TBX20 JASPAR yes 34549342
chr1 202039196 202039214 RARA JASPAR yes 34549343
Genes associated with rs535993546[chr1:202039196], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More