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- rs536012509[chr17:2023329]
Enhancers that have rs536012509[chr17:2023329]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
2019805 |
2030715 |
enh4205 |
|
|
Transcript factors that have rs536012509[chr17:2023329]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
2021879
|
2026536
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108229727
|
|
|
chr17
|
2022562
|
2026426
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108229728
|
|
|
chr17
|
2022575
|
2026421
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108229729
|
|
|
chr17
|
2023082
|
2026419
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108229730
|
|
|
chr17
|
2023120
|
2026389
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108229731
|
|
|
chr17
|
2023250
|
2026332
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108229732
|
|
|
chr17
|
2023258
|
2026292
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108229733
|
|
|
chr17
|
2023292
|
2026047
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108229734
|
|
|
chr17
|
2023317
|
2023335
|
RARA
|
JASPAR
|
yes
|
|
52726060
|
|
|
chr17
|
2023328
|
2023343
|
TFAP2A
|
JASPAR
|
yes
|
|
52726061
|
|
Genes associated with rs536012509[chr17:2023329], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |