EnhancerDB
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  3. rs536058423[chr17:76938645]
Enhancers that have rs536058423[chr17:76938645]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76924065 76939144 enh17419
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs536058423[chr17:76938645]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76937875 76938716 TCF7L2 GTRD no Colon (HCT116) 21795453
chr17 76937908 76938896 TCF7L2 GTRD no Colon (HCT116) 21795454
chr17 76938642 76938657 FOXP1 JASPAR yes 56191347
chr17 76938643 76938658 FOXP1 JASPAR yes 56191348
chr17 76938644 76938659 FOXP1 JASPAR yes 56191349
chr17 76938644 76938665 IRF1 JASPAR yes 56191350
chr17 76938645 76938660 FOXP1 JASPAR yes 56191351
chr17 76938645 76938666 IRF1 JASPAR yes 56191352
Genes associated with rs536058423[chr17:76938645], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More