EnhancerDB
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  3. rs536274541[chr17:39828830]
Enhancers that have rs536274541[chr17:39828830]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39816776 39838995 enh4409
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Blood (GM12878) Placenta Colon (HCT116) Uterus Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Thymus
Transcript factors that have rs536274541[chr17:39828830]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39828142 39828877 ZNF274 GTRD no Liver (HepG2) 108259467
chr17 39828145 39828934 ZNF274 GTRD no Liver (HepG2) 108259468
chr17 39828198 39828901 ZNF274 GTRD no Liver (HepG2) 108259472
chr17 39828201 39828869 ZNF274 GTRD no Liver (HepG2) 108259473
chr17 39828213 39828947 ZNF274 GTRD no Liver (HepG2) 108259474
chr17 39828334 39828954 ZNF274 GTRD no Liver (HepG2) 108259475
chr17 39828340 39828836 ZBTB33 GTRD no Lung (A549) 108259476
chr17 39828401 39828915 ZNF274 GTRD no Liver (HepG2) 108259477
chr17 39828425 39829096 ZNF274 GTRD no Liver (HepG2) 108259478
chr17 39828483 39829040 ZNF274 GTRD no Liver (HepG2) 108259479
chr17 39828496 39829096 ZNF274 GTRD no Liver (HepG2) 108259480
chr17 39828544 39828903 ZNF274 GTRD no Liver (HepG2) 108259481
chr17 39828823 39828843 RREB1 JASPAR yes 54271439
chr17 39828828 39828848 RREB1 JASPAR yes 54271440
chr17 39828829 39828850 IRF1 JASPAR yes 54271441
chr17 39828830 39828836 TCF4 TRANSFAC yes 54271442
chr17 39828830 39828845 FOXP1 JASPAR yes 54271443
Genes associated with rs536274541[chr17:39828830], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More