EnhancerDB
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  3. rs536390941[chr1:222000925]
Enhancers that have rs536390941[chr1:222000925]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 221995465 222021667 enh12697
Liver Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs536390941[chr1:222000925]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 222000919 222000928 SRY JASPAR yes 35572218
chr1 222000920 222000936 POU4F2 JASPAR yes 35572219
chr1 222000920 222000936 POU4F3 JASPAR yes 35572220
chr1 222000922 222000933 HOXA10 JASPAR yes 35572221
chr1 222000922 222000936 POU4F1 JASPAR yes 35572222
chr1 222000922 222000937 HNF1A JASPAR yes 35572223
chr1 222000923 222000933 GSX2 JASPAR yes 35572224
chr1 222000923 222000933 HOXB2 JASPAR yes 35572225
chr1 222000923 222000933 HOXB3 JASPAR yes 35572226
chr1 222000923 222000933 MNX1 JASPAR yes 35572227
chr1 222000923 222000933 POU6F1 JASPAR yes 35572228
chr1 222000923 222000936 HNF1B JASPAR yes 35572229
chr1 222000923 222000937 POU4F1 JASPAR yes 35572230
chr1 222000924 222000932 LMX1A JASPAR yes 35572231
chr1 222000924 222000932 LMX1B JASPAR yes 35572232
chr1 222000924 222000932 NKX6-1 JASPAR yes 35572233
chr1 222000924 222000932 NKX6-2 JASPAR yes 35572234
chr1 222000924 222000932 VAX1 JASPAR yes 35572235
chr1 222000924 222000932 VAX2 JASPAR yes 35572236
chr1 222000924 222000932 VSX1 JASPAR yes 35572237
chr1 222000924 222000932 VSX2 JASPAR yes 35572238
Genes associated with rs536390941[chr1:222000925], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More