EnhancerDB
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  3. rs536488086[chr1:52433186]
Enhancers that have rs536488086[chr1:52433186]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52426231 52441515 enh26698
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Large Intestine Liver Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs536488086[chr1:52433186]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52433165 52433186 IRF1 JASPAR yes 28879464
chr1 52433166 52433187 IRF1 JASPAR yes 28879465
chr1 52433171 52433192 IRF1 JASPAR yes 28879468
chr1 52433172 52433187 FOXP1 JASPAR yes 28879469
chr1 52433172 52433193 IRF1 JASPAR yes 28879470
chr1 52433173 52433188 STAT2 JASPAR yes 28879471
chr1 52433176 52433197 IRF1 JASPAR yes 28879472
chr1 52433177 52433192 FOXP1 JASPAR yes 28879473
chr1 52433177 52433198 IRF1 JASPAR yes 28879474
chr1 52433178 52433193 STAT2 JASPAR yes 28879475
chr1 52433181 52433202 IRF1 JASPAR yes 28879476
chr1 52433182 52433197 FOXP1 JASPAR yes 28879477
chr1 52433182 52433203 IRF1 JASPAR yes 28879478
chr1 52433183 52433198 PRDM1 JASPAR yes 28879479
chr1 52433183 52433204 IRF1 JASPAR yes 28879480
Genes associated with rs536488086[chr1:52433186], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More