EnhancerDB
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  3. rs536497355[chr17:70428018]
Enhancers that have rs536497355[chr17:70428018]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs536497355[chr17:70428018]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70427777 70428253 ZNF143 GTRD no Epithelial (MCF-7) 21785163
chr17 70428013 70428024 HOXC11 JASPAR yes 55787689
chr17 70428013 70428024 HOXC12 JASPAR yes 55787690
chr17 70428013 70428024 HOXD12 JASPAR yes 55787691
chr17 70428014 70428024 HOXC10 JASPAR yes 55787692
Genes associated with rs536497355[chr17:70428018], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More