EnhancerDB
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  3. rs536852551[chr17:80257198]
Enhancers that have rs536852551[chr17:80257198]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80234785 80270055 enh4646
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs536852551[chr17:80257198]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80256283 80257456 TCF7L2 GTRD no Colon (HCT116) 21799381
chr17 80256283 80257456 TCF7L2 GTRD no Colon (HCT116) 108311916
chr17 80256288 80258242 ZNF274 GTRD no Bone Marrow (K562) 21799382
chr17 80256288 80258242 ZNF274 GTRD no Bone Marrow (K562) 108311917
chr17 80256349 80260494 ZNF274 GTRD no Cervix (HeLa-S3) 21799383
chr17 80256349 80260494 ZNF274 GTRD no Cervix (HeLa-S3) 108311918
chr17 80256361 80257522 ZNF274 GTRD no Bone Marrow (K562) 21799384
chr17 80256361 80257522 ZNF274 GTRD no Bone Marrow (K562) 108311919
chr17 80256422 80258239 ZBTB33 GTRD no Lung (A549) 108311920
chr17 80256710 80257453 ZNF274 GTRD no Bone Marrow (K562) 21799388
chr17 80256952 80257375 TCF7L2 GTRD no Colon (HCT116) 21799393
chr17 80257048 80257563 ZNF274 GTRD no Bone Marrow (K562) 21799394
chr17 80257070 80257397 ZNF274 GTRD no Bone Marrow (K562) 21799395
chr17 80257134 80257692 ZNF274 GTRD no Bone Marrow (K562) 21799396
chr17 80257135 80257690 ZNF274 GTRD no Bone Marrow (K562) 21799397
chr17 80257182 80258247 ZNF274 GTRD no Bone Marrow (K562) 21799398
chr17 80257185 80257688 ZNF274 GTRD no Cervix (HeLa-S3) 21799399
chr17 80257188 80257201 NR2F1 JASPAR yes 56360008
chr17 80257190 80257198 NR4A2 JASPAR yes 56360009
chr17 80257190 80257204 RXRB JASPAR yes 56360010
chr17 80257190 80257204 RXRG JASPAR yes 56360011
chr17 80257190 80257205 HNF4A JASPAR yes 56360012
Genes associated with rs536852551[chr17:80257198], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More