EnhancerDB
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  3. rs536955420[chr12:125115901]
Enhancers that have rs536955420[chr12:125115901]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125108500 125127069 enh15092
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs536955420[chr12:125115901]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125115529 125115902 TCF7L2 GTRD no Colon (HCT116) 21581373
chr12 125115698 125116037 ZNF274 GTRD no Bone Marrow (K562) 21581375
chr12 125115899 125115912 NR2F1 JASPAR yes 124401520
chr12 125115901 125115919 RARA JASPAR yes 124401521
Genes associated with rs536955420[chr12:125115901], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More