EnhancerDB
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  3. rs536965088[chr1:52001389]
Enhancers that have rs536965088[chr1:52001389]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 51998705 52011795 enh359
Prostate (PC-3) Cervix (HeLa-S3) Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs536965088[chr1:52001389]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52001381 52001389 TBX5 JASPAR yes 28846905
chr1 52001381 52001390 ZEB1 JASPAR yes 28846906
chr1 52001381 52001394 ZBTB18 JASPAR yes 28846907
chr1 52001382 52001392 ID4 JASPAR yes 28846908
chr1 52001382 52001392 TCF3 JASPAR yes 28846909
chr1 52001382 52001392 TCF4 JASPAR yes 28846910
chr1 52001384 52001389 USF2 TRANSFAC yes 28846911
Genes associated with rs536965088[chr1:52001389], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More