EnhancerDB
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  3. rs537039850[chr1:40301272]
Enhancers that have rs537039850[chr1:40301272]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40278465 40303035 enh11766
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs537039850[chr1:40301272]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40301256 40301277 IRF1 JASPAR yes 28295354
chr1 40301257 40301278 IRF1 JASPAR yes 28295355
chr1 40301261 40301282 IRF1 JASPAR yes 28295356
chr1 40301262 40301277 FOXP1 JASPAR yes 28295357
chr1 40301264 40301279 FOXP1 JASPAR yes 28295358
chr1 40301266 40301281 FOXP1 JASPAR yes 28295359
chr1 40301267 40301282 FOXP1 JASPAR yes 28295360
chr1 40301268 40301283 FOXP1 JASPAR yes 28295361
chr1 40301269 40301284 FOXP1 JASPAR yes 28295362
chr1 40301271 40301286 MEF2C JASPAR yes 28295363
Genes associated with rs537039850[chr1:40301272], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More