EnhancerDB
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  3. rs537520223[chr1:201618973]
Enhancers that have rs537520223[chr1:201618973]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201600540 201629395 enh12525
Brain (SK-N-SH) Large Intestine Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Thyroid Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Uterus Heart
Transcript factors that have rs537520223[chr1:201618973]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201617825 201620050 ZNF274 GTRD no Bone Marrow (K562) 107856787
chr1 201617825 201620050 ZNF274 GTRD no Bone Marrow (K562) 107856788
chr1 201618799 201619448 ZNF143 GTRD no Epithelial (MCF-7) 107856789
chr1 201618799 201619448 ZNF143 GTRD no Epithelial (MCF-7) 107856790
chr1 201618801 201619313 ZNF143 GTRD no Epithelial (MCF-7) 107856791
chr1 201618919 201619458 SOX2 GTRD no Neural Stem Cells (H9) 107856792
chr1 201618919 201619458 SOX2 GTRD no Neural Stem Cells (H9) 107856793
chr1 201618925 201619595 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21365180
chr1 201618925 201619595 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107856794
chr1 201618925 201619595 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107856795
chr1 201618934 201619138 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856796
chr1 201618963 201618974 SPDEF JASPAR yes 34517003
Genes associated with rs537520223[chr1:201618973], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More