EnhancerDB
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  3. rs537768461[chr16:1222399]
Enhancers that have rs537768461[chr16:1222399]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1204345 1228235 enh31663
Brain (SK-N-MC) Ovary Astrocyte Lung (A549) Stomach Muscle (A673) Colon (HCT116) Thyroid Pancreas Uterus Heart
Transcript factors that have rs537768461[chr16:1222399]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1221732 1223951 TCF7L2 GTRD no Colon (HCT116) 21684328
chr16 1221732 1223951 TCF7L2 GTRD no Colon (HCT116) 108171277
chr16 1221758 1224153 TCF7L2 GTRD no Colon (HCT116) 21684329
chr16 1221758 1224153 TCF7L2 GTRD no Colon (HCT116) 108171279
chr16 1221803 1222548 TCF7L2 GTRD no Colon (HCT116) 21684330
chr16 1221803 1222548 TCF7L2 GTRD no Colon (HCT116) 108171280
chr16 1222182 1223745 ZNF143 GTRD no Epithelial (MCF-7) 108171283
chr16 1222385 1222400 TFAP2C JASPAR yes 9141542
chr16 1222387 1222399 TFAP2A JASPAR yes 9141544
chr16 1222387 1222399 TFAP2B JASPAR yes 9141545
chr16 1222387 1222399 TFAP2C JASPAR yes 9141546
chr16 1222387 1222402 TFAP2A JASPAR yes 9141547
Genes associated with rs537768461[chr16:1222399], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More