EnhancerDB
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  3. rs538228113[chr17:57507202]
Enhancers that have rs538228113[chr17:57507202]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57488685 57509755 enh17259
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Brain (SK-N-SH) Esophagus Astrocyte Liver Bone (Osteoblast) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Spleen Uterus Heart
Transcript factors that have rs538228113[chr17:57507202]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57505689 57508447 ZBTB33 GTRD no Brain (SK-N-SH) 21775032
chr17 57506134 57507290 ZNF274 GTRD no Bone Marrow (K562) 21775036
chr17 57506924 57507669 ZNF274 GTRD no Bone Marrow (K562) 21775039
chr17 57507125 57509289 ZNF274 GTRD no Blood (GM12878) 108276006
chr17 57507198 57507213 HNF1A JASPAR yes 55059330
chr17 57507199 57507213 ONECUT1 JASPAR yes 55059331
chr17 57507199 57507213 ONECUT2 JASPAR yes 55059332
chr17 57507199 57507213 ONECUT3 JASPAR yes 55059333
chr17 57507200 57507210 CUX1 JASPAR yes 55059334
chr17 57507200 57507210 CUX2 JASPAR yes 55059335
chr17 57507202 57507214 PBX1 JASPAR yes 55059336
Genes associated with rs538228113[chr17:57507202], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More