EnhancerDB
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  3. rs538375777[chr1:40294751]
Enhancers that have rs538375777[chr1:40294751]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40278465 40303035 enh11766
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs538375777[chr1:40294751]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40294742 40294756 SPI1 JASPAR yes 28294489
chr1 40294746 40294761 LEF1 JASPAR yes 28294490
chr1 40294747 40294761 TCF7L2 JASPAR yes 28294491
chr1 40294751 40294759 GATA3 JASPAR yes 28294492
Genes associated with rs538375777[chr1:40294751], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More