EnhancerDB
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  3. rs538378234[chr1:39427043]
Enhancers that have rs538378234[chr1:39427043]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39414298 39432055 enh11754
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs538378234[chr1:39427043]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39427026 39427043 RARA JASPAR yes 28244488
chr1 39427026 39427043 RXRA JASPAR yes 28244489
chr1 39427033 39427043 RORA JASPAR yes 28244491
chr1 39427034 39427045 ESRRA JASPAR yes 28244492
chr1 39427034 39427045 ESRRB JASPAR yes 28244493
chr1 39427034 39427047 NR2F1 JASPAR yes 28244494
chr1 39427036 39427044 NR4A2 JASPAR yes 28244495
Genes associated with rs538378234[chr1:39427043], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More