EnhancerDB
  1. Home
  2. SNP
  3. rs538396642[chr12:46549418]
Enhancers that have rs538396642[chr12:46549418]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46542685 46564475 enh14673
Skin (Keratinocyte) Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Brain (SK-N-SH) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs538396642[chr12:46549418]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46546181 46550702 ZNF274 GTRD no Cervix (HeLa-S3) 21540604
chr12 46549107 46549522 TCF7L2 GTRD no Colon (HCT116) 21540667
chr12 46549120 46549723 TCF7L2 GTRD no Colon (HCT116) 21540668
chr12 46549206 46550411 AR GTRD no Prostate (PC-3) 21540669
chr12 46549242 46550958 ZNF274 GTRD no Cervix (HeLa-S3) 21540670
chr12 46549399 46550814 ZBTB33 GTRD no Lung (A549) 21540671
chr12 46549402 46550594 ZNF274 GTRD no Cervix (HeLa-S3) 21540672
chr12 46549408 46550774 ZBTB33 GTRD no Lung (A549) 21540673
Genes associated with rs538396642[chr12:46549418], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More