EnhancerDB
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  3. rs538396906[chr6:17720399]
Enhancers that have rs538396906[chr6:17720399]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 17712332 17727615 enh23084
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myotube) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs538396906[chr6:17720399]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 17720388 17720399 FOXB1 JASPAR yes 100396919
chr6 17720389 17720400 FOXB1 JASPAR yes 100396920
chr6 17720390 17720401 FOXB1 JASPAR yes 100396922
chr6 17720391 17720402 FOXB1 JASPAR yes 100396923
chr6 17720392 17720400 FOXL1 JASPAR yes 100396924
chr6 17720392 17720403 FOXB1 JASPAR yes 100396925
chr6 17720393 17720404 FOXB1 JASPAR yes 100396926
chr6 17720394 17720402 FOXL1 JASPAR yes 100396927
chr6 17720394 17720405 FOXB1 JASPAR yes 100396928
chr6 17720396 17720404 FOXL1 JASPAR yes 100396929
chr6 17720399 17720420 IRF1 JASPAR yes 100396930
Genes associated with rs538396906[chr6:17720399], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More