EnhancerDB
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  3. rs538417446[chr6:41947143]
Enhancers that have rs538417446[chr6:41947143]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 41927525 41949869 enh23245
Bone Marrow (K562) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Astrocyte Blood (OCI-LY7) Stomach Placenta Adrenal Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs538417446[chr6:41947143]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 41947133 41947146 SMAD2 JASPAR yes 101683790
chr6 41947140 41947155 SCRT1 JASPAR yes 101683791
chr6 41947141 41947151 ID4 JASPAR yes 101683792
chr6 41947141 41947151 TCF3 JASPAR yes 101683793
chr6 41947141 41947151 TCF4 JASPAR yes 101683794
chr6 41947142 41947151 SNAI2 JASPAR yes 101683795
chr6 41947143 41947148 USF2 TRANSFAC yes 101683796
Genes associated with rs538417446[chr6:41947143], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More