EnhancerDB
  1. Home
  2. SNP
  3. rs538491472[chr19:12896245]
Enhancers that have rs538491472[chr19:12896245]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 12880762 12907555 enh5013
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Placenta Blood (Karpas-422) Muscle (Myoblast) Uterus Blood (T-cell)
Transcript factors that have rs538491472[chr19:12896245]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 12895856 12896256 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386392
chr19 12895912 12896348 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386393
chr19 12895913 12897618 ZNF143 GTRD no Epithelial (MCF-7) 108386394
chr19 12895913 12897618 ZNF143 GTRD no Epithelial (MCF-7) 108386395
chr19 12895913 12897618 ZNF143 GTRD no Epithelial (MCF-7) 108386396
chr19 12895929 12896383 RUNX3 UCSC Txn Factor no Conserved 108386397
chr19 12895929 12896383 RUNX3 UCSC Txn Factor no Conserved 108386398
chr19 12895929 12896383 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386399
chr19 12895929 12896383 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386400
chr19 12895997 12896433 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386402
chr19 12895997 12896433 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386403
chr19 12896021 12896341 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386404
chr19 12896055 12896375 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386405
chr19 12896055 12896375 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386406
chr19 12896109 12898236 TCF7L2 GTRD no Colon (HCT116) 108386407
chr19 12896109 12898236 TCF7L2 GTRD no Colon (HCT116) 108386408
chr19 12896109 12898236 TCF7L2 GTRD no Colon (HCT116) 108386409
chr19 12896116 12896844 ZNF274 GTRD no Blood (GM12878) 108386410
chr19 12896116 12896844 ZNF274 GTRD no Blood (GM12878) 108386411
chr19 12896132 12896568 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386412
chr19 12896132 12896568 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386413
chr19 12896196 12897007 ZNF274 GTRD no Blood (GM12878) 108386414
chr19 12896196 12897007 ZNF274 GTRD no Blood (GM12878) 108386415
chr19 12896229 12896815 ZNF274 GTRD no Blood (GM12878) 108386416
chr19 12896235 12896974 ZNF274 GTRD no Blood (GM12878) 108386417
chr19 12896235 12896974 ZNF274 GTRD no Blood (GM12878) 108386418
chr19 12896243 12896255 FOXI1 JASPAR yes 112493861
Genes associated with rs538491472[chr19:12896245], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More