EnhancerDB
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  3. rs538501152[chr5:171571327]
Enhancers that have rs538501152[chr5:171571327]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171565199 171613524 enh8878
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs538501152[chr5:171571327]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171571324 171571339 TFAP2A JASPAR yes 67767388
chr5 171571324 171571339 TFAP2C JASPAR yes 67767389
chr5 171571325 171571338 TFAP2A JASPAR yes 67767390
chr5 171571325 171571338 TFAP2B JASPAR yes 67767391
chr5 171571325 171571338 TFAP2C JASPAR yes 67767392
chr5 171571327 171571338 TFAP2A JASPAR yes 67767393
chr5 171571327 171571341 PLAG1 JASPAR yes 67767394
chr5 171571327 171571348 ZNF263 JASPAR yes 67767395
Genes associated with rs538501152[chr5:171571327], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More