EnhancerDB
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  3. rs538511580[chr16:88330166]
Enhancers that have rs538511580[chr16:88330166]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88327201 88357367 enh16902
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus
Transcript factors that have rs538511580[chr16:88330166]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88329349 88336233 ZBTB33 GTRD no Lung (A549) 21735886
chr16 88329477 88337057 ZBTB33 GTRD no Lung (A549) 21735887
chr16 88329704 88335103 ZBTB33 GTRD no Lung (A549) 21735888
chr16 88329759 88330238 ZBTB33 GTRD no Lung (A549) 21735889
chr16 88329862 88330335 ZNF274 GTRD no Cervix (HeLa-S3) 21735890
chr16 88330003 88333362 ZBTB33 GTRD no Lung (A549) 21735891
chr16 88330162 88330172 BHLHE40 JASPAR yes 12275104
chr16 88330162 88330172 BHLHE41 JASPAR yes 12275105
chr16 88330162 88330172 MLXIPL JASPAR yes 12275106
chr16 88330162 88330172 MLX JASPAR yes 12275107
chr16 88330162 88330172 TFE3 JASPAR yes 12275108
chr16 88330162 88330172 TFEB JASPAR yes 12275109
chr16 88330162 88330172 TFEC JASPAR yes 12275110
chr16 88330163 88330173 MAX JASPAR yes 12275111
chr16 88330164 88330169 MYC TRANSFAC yes 12275112
chr16 88330164 88330169 USF1 TRANSFAC yes 12275113
chr16 88330164 88330169 USF2 TRANSFAC yes 12275114
chr16 88330164 88330172 USF1 TRANSFAC yes 12275115
Genes associated with rs538511580[chr16:88330166], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More