EnhancerDB
  1. Home
  2. SNP
  3. rs538530427[chr1:212650259]
Enhancers that have rs538530427[chr1:212650259]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212648565 212664795 enh12641
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs538530427[chr1:212650259]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212650218 212650807 ZBTB33 GTRD no Brain (SK-N-SH) 21378782
chr1 212650218 212650807 ZBTB33 GTRD no Brain (SK-N-SH) 107868320
chr1 212650252 212650264 HNF1B JASPAR yes 35127482
Genes associated with rs538530427[chr1:212650259], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More