EnhancerDB
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  3. rs538560709[chr19:4973735]
Enhancers that have rs538560709[chr19:4973735]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4966316 4995955 enh4974
Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs538560709[chr19:4973735]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4971025 4973751 TCF7L2 GTRD no Colon (HCT116) 21842892
chr19 4971025 4973751 TCF7L2 GTRD no Colon (HCT116) 108374026
chr19 4973730 4973741 HOXC13 JASPAR yes 112200768
chr19 4973733 4973739 ETS1 JASPAR yes 112200769
chr19 4973735 4973747 YY1 JASPAR yes 112200770
Genes associated with rs538560709[chr19:4973735], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More