EnhancerDB
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  3. rs538590100[chr1:43938596]
Enhancers that have rs538590100[chr1:43938596]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43924725 43950195 enh11811
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Stomach
Transcript factors that have rs538590100[chr1:43938596]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43938595 43938610 TFAP2C JASPAR yes 28497805
chr1 43938596 43938608 TFAP2A JASPAR yes 28497806
Genes associated with rs538590100[chr1:43938596], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More