EnhancerDB
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  3. rs538609322[chr1:172878825]
Enhancers that have rs538609322[chr1:172878825]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
chr1 172878579 172879356 vista3924
VISTA
Transcript factors that have rs538609322[chr1:172878825]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172878618 172879028 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21350430
chr1 172878618 172879028 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107846246
chr1 172878746 172879190 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107846247
chr1 172878821 172878832 FOXH1 JASPAR yes 33164807
chr1 172878821 172878832 FOXH1 JASPAR yes 118400534
Genes associated with rs538609322[chr1:172878825], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More