EnhancerDB
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  3. rs538611619[chr1:9960144]
Enhancers that have rs538611619[chr1:9960144]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9956449 9968797 enh11490
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Lung (PC-9) Lung Blood (GM12878) Stomach Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs538611619[chr1:9960144]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9959923 9961663 ZNF274 GTRD no Blood (GM12878) 21325229
chr1 9959923 9961663 ZNF274 GTRD no Blood (GM12878) 107802035
chr1 9960125 9960146 IRF1 JASPAR yes 26690906
chr1 9960127 9960148 IRF1 JASPAR yes 26690909
chr1 9960128 9960149 IRF1 JASPAR yes 26690911
chr1 9960129 9960144 FOXP1 JASPAR yes 26690912
chr1 9960131 9960146 FOXP1 JASPAR yes 26690913
chr1 9960133 9960148 FOXP1 JASPAR yes 26690914
chr1 9960135 9960147 FOXC2 JASPAR yes 26690915
chr1 9960136 9960150 ONECUT3 JASPAR yes 26690916
chr1 9960138 9960147 SRY JASPAR yes 26690917
chr1 9960139 9960151 PBX1 JASPAR yes 26690918
chr1 9960140 9960154 ONECUT1 JASPAR yes 26690919
chr1 9960140 9960154 ONECUT2 JASPAR yes 26690920
chr1 9960140 9960154 ONECUT3 JASPAR yes 26690921
chr1 9960144 9960153 SOX9 JASPAR yes 26690922
Genes associated with rs538611619[chr1:9960144], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More