EnhancerDB
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  3. rs538616181[chr2:238362533]
Enhancers that have rs538616181[chr2:238362533]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238336205 238371002 enh19393
Brain (SK-N-MC) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs538616181[chr2:238362533]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238362522 238362536 TLX1 JASPAR yes 82111381
chr2 238362525 238362536 USF2 JASPAR yes 82111382
chr2 238362526 238362536 MAX JASPAR yes 82111383
chr2 238362531 238362543 PKNOX2 JASPAR yes 82111384
chr2 238362533 238362542 SNAI2 JASPAR yes 82111385
Genes associated with rs538616181[chr2:238362533], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More