EnhancerDB
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  3. rs538625988[chr17:79022807]
Enhancers that have rs538625988[chr17:79022807]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79008825 79027145 enh17433
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs538625988[chr17:79022807]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79022805 79022819 GLIS2 JASPAR yes 56301142
chr17 79022805 79022819 ZIC1 JASPAR yes 56301143
chr17 79022805 79022820 ZIC3 JASPAR yes 56301144
chr17 79022805 79022820 ZIC4 JASPAR yes 56301145
chr17 79022807 79022821 ZIC1 JASPAR yes 56301146
chr17 79022807 79022822 ZIC3 JASPAR yes 56301147
chr17 79022807 79022822 ZIC4 JASPAR yes 56301148
Genes associated with rs538625988[chr17:79022807], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More