EnhancerDB
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  3. rs538741404[chr12:96614026]
Enhancers that have rs538741404[chr12:96614026]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96582645 96638775 enh14921
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs538741404[chr12:96614026]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96612952 96614145 POLR2A UCSC Txn Factor no Conserved 108053154
chr12 96613471 96614121 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21567633
chr12 96613471 96614121 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108053168
chr12 96613576 96614040 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21567643
chr12 96613576 96614040 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108053182
chr12 96613601 96614065 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21567648
chr12 96613601 96614065 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108053187
chr12 96613617 96614061 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21567650
chr12 96613617 96614061 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108053189
chr12 96613904 96614382 ZNF274 GTRD no Bone Marrow (K562) 108053200
chr12 96614014 96614035 IRF1 JASPAR yes 123049148
chr12 96614016 96614031 PRDM1 JASPAR yes 123049149
chr12 96614020 96614041 IRF1 JASPAR yes 123049150
chr12 96614021 96614042 ZNF263 JASPAR yes 123049151
chr12 96614025 96614046 ZNF263 JASPAR yes 123049152
Genes associated with rs538741404[chr12:96614026], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More