EnhancerDB
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  3. rs538809609[chr16:85485969]
Enhancers that have rs538809609[chr16:85485969]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85477350 85511195 enh16870
Bone Marrow (K562) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs538809609[chr16:85485969]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85484406 85487529 ZNF143 GTRD no Epithelial (MCF-7) 21726085
chr16 85484435 85486918 ZNF143 GTRD no Epithelial (MCF-7) 21726086
chr16 85484462 85486895 ZNF143 GTRD no Epithelial (MCF-7) 21726088
chr16 85485708 85486809 ZNF143 GTRD no Epithelial (MCF-7) 21726091
chr16 85485875 85486911 ZNF143 GTRD no Epithelial (MCF-7) 21726092
chr16 85485954 85485969 AR JASPAR yes 12063002
chr16 85485967 85485981 PLAG1 JASPAR yes 12063003
Genes associated with rs538809609[chr16:85485969], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More