EnhancerDB
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  3. rs538858509[chr12:96633586]
Enhancers that have rs538858509[chr12:96633586]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96582645 96638775 enh14921
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs538858509[chr12:96633586]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96633445 96633889 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21567658
chr12 96633445 96633889 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108053206
chr12 96633568 96633930 ZNF143 GTRD no Epithelial (MCF-7) 21567659
chr12 96633568 96633930 ZNF143 GTRD no Epithelial (MCF-7) 108053207
Genes associated with rs538858509[chr12:96633586], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More