EnhancerDB
  1. Home
  2. SNP
  3. rs538878716[chr12:125113146]
Enhancers that have rs538878716[chr12:125113146]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125108500 125127069 enh15092
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs538878716[chr12:125113146]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125112718 125113159 ZNF143 GTRD no Epithelial (MCF-7) 21581365
chr12 125113136 125113151 TFAP2A JASPAR yes 124401113
chr12 125113138 125113153 TFAP2C JASPAR yes 124401114
chr12 125113139 125113151 TFAP2A JASPAR yes 124401115
chr12 125113145 125113158 NFKB1 JASPAR yes 124401116
Genes associated with rs538878716[chr12:125113146], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More