-
Home
- SNP
- rs539000181[chr17:48641460]
Enhancers that have rs539000181[chr17:48641460]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
48639545 |
48645615 |
enh17221 |
|
|
Transcript factors that have rs539000181[chr17:48641460]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
48641315
|
48642862
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108270842
|
|
|
chr17
|
48641389
|
48643201
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108270843
|
|
|
chr17
|
48641419
|
48642840
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108270844
|
|
|
chr17
|
48641450
|
48643104
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108270845
|
|
|
chr17
|
48641452
|
48641463
|
STAT1
|
JASPAR
|
yes
|
|
54707828
|
|
|
chr17
|
48641458
|
48643089
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108270846
|
|
Genes associated with rs539000181[chr17:48641460], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |