EnhancerDB
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  3. rs539055747[chr1:9607511]
Enhancers that have rs539055747[chr1:9607511]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9595905 9627275 enh49
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539055747[chr1:9607511]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9607497 9607518 IRF1 JASPAR yes 26660202
chr1 9607500 9607514 IRF7 JASPAR yes 26660203
chr1 9607503 9607518 FOXP1 JASPAR yes 26660204
chr1 9607503 9607524 IRF1 JASPAR yes 26660205
chr1 9607504 9607519 FOXP1 JASPAR yes 26660206
chr1 9607505 9607520 FOXP1 JASPAR yes 26660207
chr1 9607505 9607526 IRF1 JASPAR yes 26660208
chr1 9607506 9607521 FOXP1 JASPAR yes 26660209
chr1 9607507 9607522 FOXP1 JASPAR yes 26660210
chr1 9607507 9607528 IRF1 JASPAR yes 26660211
chr1 9607508 9607523 FOXP1 JASPAR yes 26660212
chr1 9607509 9607524 FOXP1 JASPAR yes 26660213
chr1 9607511 9607532 IRF1 JASPAR yes 26660214
Genes associated with rs539055747[chr1:9607511], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More