EnhancerDB
  1. Home
  2. SNP
  3. rs539068688[chr19:5001201]
Enhancers that have rs539068688[chr19:5001201]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4999583 5006475 enh17876
Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Thyroid Lung (PC-9) Breast Neural Stem Cells (H9) Stomach
Transcript factors that have rs539068688[chr19:5001201]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 5001190 5001206 ZNF143 JASPAR yes 112204323
chr19 5001191 5001205 TLX1 JASPAR yes 112204324
chr19 5001197 5001206 NFIX JASPAR yes 112204325
chr19 5001199 5001205 NFIC JASPAR yes 112204326
Genes associated with rs539068688[chr19:5001201], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More