EnhancerDB
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  3. rs539070432[chr1:167229956]
Enhancers that have rs539070432[chr1:167229956]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 167228665 167248455 enh705
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Lung (A549) Blood (GM12878) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Pancreas (Panc1) Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs539070432[chr1:167229956]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 167229952 167229970 IRF2 JASPAR yes 32854726
chr1 167229953 167229974 IRF1 JASPAR yes 32854727
chr1 167229955 167229970 PRDM1 JASPAR yes 32854728
Genes associated with rs539070432[chr1:167229956], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More